Structure of PDB 4qr9 Chain A

Receptor sequence
>4qr9A (length=75) Species: 10116 (Rattus norvegicus) [Search protein sequence]
GSKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK
EKGKFEDMAKADKARYEREMKTYIP
3D structure
PDB4qr9 Two high-mobility group box domains act together to underwind and kink DNA.
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A K7 R9 G10 Q20 R23 F37 F40 K3 R5 G6 Q16 R19 F33 F36
BS02 dna A K7 S13 Y15 F37 S38 S41 K42 S45 W48 K3 S9 Y11 F33 S34 S37 K38 S41 W44
BS03 dna A G5 S6 K7 G1 S2 K3
Gene Ontology
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:4qr9, PDBe:4qr9, PDBj:4qr9
PDBsum4qr9
PubMed26143914
UniProtP63159|HMGB1_RAT High mobility group protein B1 (Gene Name=Hmgb1)

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