Structure of PDB 4qg3 Chain A

Receptor sequence
>4qg3A (length=228) Species: 274 (Thermus thermophilus) [Search protein sequence]
PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGID
PRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEII
QKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIG
EIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHK
PEGAKGTFLRSVYVTTTMVPSVRINPHS
3D structure
PDB4qg3 Protein-RNA affinity of ribosomal protein L1 mutants does not correlate with the number of intermolecular interactions.
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A H3 G4 K5 R6 Y7 A35 K36 F37 T40 E42 H44 K46 P133 R134 D166 K167 T168 H172 S211 Y213 T217 M218 V219 S221 H3 G4 K5 R6 Y7 A35 K36 F37 T40 E42 H44 K46 P133 R134 D166 K167 T168 H172 S211 Y213 T217 M218 V219 S221 PDBbind-CN: Kd=18.7nM
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4qg3, PDBe:4qg3, PDBj:4qg3
PDBsum4qg3
PubMed25664749
UniProtP27150|RL1_THETH Large ribosomal subunit protein uL1 (Gene Name=rplA)

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