Structure of PDB 4q85 Chain A

Receptor sequence
>4q85A (length=559) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
ALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGK
GATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPL
TENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQ
SDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIA
ESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVV
LFNPANGTCFASFGAHPDFGVALERTVTELFTPPTFDDEEVAEHTNLETH
FIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYI
ADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEW
EKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLA
LAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPL
QYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKA
YEKLQRAKA
3D structure
PDB4q85 Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
ChainA
Resolution3.29 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 APC A K61 A70 S71 G74 E75 E78 S184 A185 Q195 E199 R203 R286 K50 A59 S60 G63 E64 E67 S173 A174 Q184 E188 R192 R275
BS02 MG A L216 Y247 L334 K336 L205 Y236 L312 K314
BS03 MG A E78 E199 E67 E188
BS04 MG A E202 E290 E191 E279
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0047693 ATP diphosphatase activity
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4q85, PDBe:4q85, PDBj:4q85
PDBsum4q85
PubMed25129028
UniProtP75838|YCAO_ECOLI Ribosomal protein S12 methylthiotransferase accessory factor YcaO (Gene Name=ycaO)

[Back to BioLiP]