Structure of PDB 4q6p Chain A

Receptor sequence
>4q6pA (length=417) Species: 85962 (Helicobacter pylori 26695) [Search protein sequence]
MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVE
VVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSI
DAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFA
NNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFAN
EASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNL
WAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQE
VFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESF
YIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRI
EFYKNNAFSGMILVKFV
3D structure
PDB4q6p Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
ChainA
Resolution2.62 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A Q46 E49 H128 Q25 E28 H107
BS02 ZN A H62 D254 H41 D233
BS03 ZN A Q320 E321 Q299 E300
BS04 CA A N382 V383 F386 E396 N361 V362 F365 E375
BS05 API A N93 R94 H126 H128 W148 T208 E222 N72 R73 H105 H107 W127 T187 E201
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4q6p, PDBe:4q6p, PDBj:4q6p
PDBsum4q6p
PubMed25372672
UniProtO25708

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