Structure of PDB 4pgi Chain A

Receptor sequence
>4pgiA (length=222) Species: 74547 (Prochlorococcus marinus str. MIT 9313) [Search protein sequence]
HALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLPDHVEELKRL
AKMEMRHKKGFTACGKNLGVKADMDFAREFFAPLRDNFQTALGQGKTPTC
LLIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLK
ANLESCREELLEANRENLPLIRRMADQVAGDAAVLQMDKEDLIEDFLIAY
QESLTEIGFNTREITRMAAAAL
3D structure
PDB4pgi Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound.
ChainA
Resolution2.08 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.99.5: aldehyde oxygenase (deformylating).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A E45 E73 H76 E26 E54 H57
BS02 FE A E73 E128 H160 E54 E109 H141
BS03 Y69 A G44 E73 E128 F130 A134 A194 F215 G25 E54 E109 F111 A115 A175 F196
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
GO:0046914 transition metal ion binding
GO:0071771 aldehyde oxygenase (deformylating) activity

View graph for
Molecular Function
External links
PDB RCSB:4pgi, PDBe:4pgi, PDBj:4pgi
PDBsum4pgi
PubMed25222710
UniProtQ7V6D4|ALDEC_PROMM Aldehyde decarbonylase (Gene Name=PMT_1231)

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