Structure of PDB 4pf5 Chain A

Receptor sequence
>4pf5A (length=237) Species: 3823 (Canavalia ensiformis) [Search protein sequence]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
3D structure
PDB4pf5 Synthesis of High-Mannose Oligosaccharide Analogues through Click Chemistry: True Functional Mimics of Their Natural Counterparts Against Lectins?
ChainA
Resolution2.04 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A E8 D10 D19 H24 E8 D10 D19 H24
BS02 MN A D10 Y12 N14 D19 D10 Y12 N14 D19
BS03 M3N A Y12 N14 G98 L99 Y100 A207 D208 R228 Y12 N14 G98 L99 Y100 A207 D208 R228 PDBbind-CN: -logKd/Ki=5.48,Kd=3.3uM
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0006952 defense response
GO:0050688 regulation of defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4pf5, PDBe:4pf5, PDBj:4pf5
PDBsum4pf5
PubMed25483029
UniProtP02866|CONA_CANEN Concanavalin-A

[Back to BioLiP]