Structure of PDB 4pd1 Chain A

Receptor sequence
>4pd1A (length=404) Species: 10116 (Rattus norvegicus) [Search protein sequence]
FPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPA
SVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCG
ADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECV
LAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPG
KIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIIT
SGGDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPG
NPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRC
ILTWHHQEPLPWAQSTSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVM
VIGL
3D structure
PDB4pd1 Modulation of gephyrin-glycine receptor affinity by multivalency.
ChainA
Resolution1.975 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.10.1.1: molybdopterin molybdotransferase.
2.7.7.75: molybdopterin adenylyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A M326 D327 F330 R653 Y673 M711 P713 Y719 L722 E726 V727 D729 M6 D7 F10 R327 Y347 M380 P382 Y388 L391 E395 V396 D398
Gene Ontology
Biological Process
GO:0006777 Mo-molybdopterin cofactor biosynthetic process
GO:0032324 molybdopterin cofactor biosynthetic process

View graph for
Biological Process
External links
PDB RCSB:4pd1, PDBe:4pd1, PDBj:4pd1
PDBsum4pd1
PubMed25137389
UniProtQ03555|GEPH_RAT Gephyrin (Gene Name=Gphn)

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