Structure of PDB 4oz6 Chain A

Receptor sequence
>4oz6A (length=172) Species: 1789 (Mycobacterium xenopi) [Search protein sequence]
AITGDALVALPEGESVRIADIVPGARPNSDNAIDLKVLDRHGNPVLADRL
FHSGEHPVYTVRTVEGLRVTGTANHPLLCLVDVAGVPTLLWKLIDEIKPG
DYAVIQRSAFVPGLVRFLAQAIADELTDGRFYYAKVASVTDAGVQPVYSL
RVDACDPAFITNGFVSHNTEAP
3D structure
PDB4oz6 Structure of the branched intermediate in protein splicing.
ChainA
Resolution2.786 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) A1 T72 N74 H75 H197 N198
Catalytic site (residue number reindexed from 1) A1 T72 N74 H75 H167 N168
Enzyme Commision number 5.6.2.2: DNA topoisomerase (ATP-hydrolyzing).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A T199 E200 A201 T169 E170 A171
BS02 MG A D95 V169 D95 V139
Gene Ontology
Biological Process
GO:0016539 intein-mediated protein splicing

View graph for
Biological Process
External links
PDB RCSB:4oz6, PDBe:4oz6, PDBj:4oz6
PDBsum4oz6
PubMed24778214
UniProtP72065|GYRA_MYCXE DNA gyrase subunit A (Fragment) (Gene Name=gyrA)

[Back to BioLiP]