Structure of PDB 4ovd Chain A

Receptor sequence
>4ovdA (length=422) Species: 521095 (Lancefieldella parvula DSM 20469) [Search protein sequence]
NDIVLHARRGTIYDRNGNVLAMSVDCKNNTKRVYPYGNVGVQILGFVNAD
NEGASGLEYYYNDILAGTNGHMISNITEAQNGQDIVLSIDIELQKKAEEQ
LTAAVKDFEAKQGGSIMAMNPRTGEIYAAASYPLPDFVDYESLNLKLVSS
IYEPGSVFKVITTSIGVDNNLFGPNSTFNIPTELQVGDNKVTDDDWRTSA
MDMSVREMLRRSSNVGMAFLETQLIGDKRFAEGIDKFGIGHTTGIDFPGE
ATGIVRSLDQYEGPTGGNMAFGQGLAIPFIQVIRAYTAVANKGTMVTPHF
MVSKGGQEVSWPTKDVISSSTASAELDMMTTVVKEGTGVRAGIYGYTVAG
KTGTGQQVVEETGSYGENSGFVASFCGIVNPSESDLMVYVGLNDTHQLAS
QSAAVVFSQFAKDAATRLNIQP
3D structure
PDB4ovd Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469
ChainA
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.4.1.129: Transferred entry: 2.4.99.28.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA A S361 T501 S212 T352
Gene Ontology
Molecular Function
GO:0008658 penicillin binding
GO:0016757 glycosyltransferase activity
Biological Process
GO:0071555 cell wall organization
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:4ovd, PDBe:4ovd, PDBj:4ovd
PDBsum4ovd
PubMed
UniProtC8W9X3

[Back to BioLiP]