Structure of PDB 4omy Chain A

Receptor sequence
>4omyA (length=97) Species: 380 (Sinorhizobium fredii) [Search protein sequence]
QPLSPEKHEEAEIAAGFLSAMANPKRLLILDSLVKEEMAVGALANKVGLS
QSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYG
3D structure
PDB4omy Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR.
ChainA
Resolution3.062 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A V45 Q56 S57 S60 Q61 T80 I81 V40 Q51 S52 S55 Q56 T75 I76 PDBbind-CN: Kd=0.43uM
BS02 dna A N28 R31 S57 Q61 H62 N23 R26 S52 Q56 H57 PDBbind-CN: Kd=0.43uM
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4omy, PDBe:4omy, PDBj:4omy
PDBsum4omy
PubMed24733893
UniProtQ83TD2

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