Structure of PDB 4ohv Chain A

Receptor sequence
>4ohvA (length=396) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]
EENVQEFVLKEDCELRFAAGDDSDVCLELVKGYAEIFGTELLLNKKYTFP
AKSRVAAFTWKGATIELVGTTESAYVAESTPMVIYLNIHAAMEEVRKKRE
EQAKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSV
SVPGTVAAVLVQKTADVIDGFERNQPIVFNFGHTSPSANLSLYEALFKEM
ATTLNAQIQENDEAKIGGMIINTCGWVDGEGYKCIVKAASAFEVDVVIVL
DHERLYSDLSKELPEFVRLTHVPKSGGVEQRTGQIRSKMRGENVHRYFYG
TRANNLYPFTFDVSFDDVTLCKIGKLVIMEPSADIKHHLFAFSRSTKADE
NVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLD
3D structure
PDB4ohv RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ANP A R18 A58 T123 D124 G126 K127 T128 T129 G284 R288 R293 R16 A56 T116 D117 G119 K120 T121 T122 G277 R281 R286
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0051731 polynucleotide 5'-hydroxyl-kinase activity
GO:0051736 ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
Biological Process
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 RNA processing
GO:0006397 mRNA processing
GO:0031124 mRNA 3'-end processing
Cellular Component
GO:0005634 nucleus
GO:0005849 mRNA cleavage factor complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4ohv, PDBe:4ohv, PDBj:4ohv
PDBsum4ohv
PubMed24813946
UniProtP52874|CLP1_CAEEL Protein clpf-1 (Gene Name=clpf-1)

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