Structure of PDB 4mvi Chain A

Receptor sequence
>4mviA (length=172) Species: 9606 (Homo sapiens) [Search protein sequence]
DLIPAPPLSKVPLQQNFQDNQFHGKWYVVGVAGNKSLREDKDPWKMYATI
YELKEDKSYNVTSVGFGTKKCHYKIRTFVPGSQPGEFTLGRIKSRPGRTS
ALVRVVSTNYNQHAMVFFKVVQQNRESFNITLYGRTKELTSELKENFIRF
SKSLGLPENHIVFPVPIDQCID
3D structure
PDB4mvi High-affinity Anticalins with aggregation-blocking activity directed against the Alzheimer beta-amyloid peptide.
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A W49 K50 Y52 T54 S68 V69 G70 H77 K79 R81 T104 F123 V125 Q127 N134 T136 Y138 P169 W44 K45 Y47 T49 S63 V64 G65 H72 K74 R76 T99 F118 V120 Q122 N129 T131 Y133 P164
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005515 protein binding
GO:0036094 small molecule binding
GO:0042802 identical protein binding
GO:0140315 iron ion sequestering activity
GO:1903981 enterobactin binding
Biological Process
GO:0006826 iron ion transport
GO:0006915 apoptotic process
GO:0015891 siderophore transport
GO:0042742 defense response to bacterium
GO:0045087 innate immune response
GO:0120162 positive regulation of cold-induced thermogenesis
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0031410 cytoplasmic vesicle
GO:0035580 specific granule lumen
GO:0060205 cytoplasmic vesicle lumen
GO:0070062 extracellular exosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:4mvi, PDBe:4mvi, PDBj:4mvi
PDBsum4mvi
PubMed27029347
UniProtP80188|NGAL_HUMAN Neutrophil gelatinase-associated lipocalin (Gene Name=LCN2)

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