Structure of PDB 4l8d Chain A

Receptor sequence
>4l8dA (length=277) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRWEPP
3D structure
PDB4l8d Acute emergence and reversion of influenza A virus quasispecies within CD8(+) T cell antigenic peptides.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E63 K66 Q70 W73 V76 S77 N80 Y84 L95 Q97 F116 Y123 T143 K146 W147 S150 H155 Y156 Y159 W167 Y171 Y7 E63 K66 Q70 W73 V76 S77 N80 Y84 L95 Q97 F116 Y123 T143 K146 W147 S150 H155 Y156 Y159 W167 Y171
External links
PDB RCSB:4l8d, PDBe:4l8d, PDBj:4l8d
PDBsum4l8d
PubMed24173108
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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