Structure of PDB 4kmv Chain A

Receptor sequence
>4kmvA (length=137) Species: 129555 (Amphitrite ornata) [Search protein sequence]
GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDANTLVQMKQHSSLTTGNFEKF
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
3D structure
PDB4kmv Complexes of dual-function hemoglobin/dehaloperoxidase with substrate 2,4,6-trichlorophenol are inhibitory and indicate binding of halophenol to compound I.
ChainA
Resolution1.44 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 HEM A F35 H55 V59 L83 Q88 H89 L92 N96 F97 F100 F35 H55 V59 L83 Q88 H89 L92 N96 F97 F100
BS02 OXY A H55 V59 H55 V59
BS03 T6C A I20 F21 F24 H55 T56 V59 F100 I20 F21 F24 H55 T56 V59 F100
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0005344 oxygen carrier activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0015671 oxygen transport
GO:0098869 cellular oxidant detoxification

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4kmv, PDBe:4kmv, PDBj:4kmv
PDBsum4kmv
PubMed23952341
UniProtQ9NAV8

[Back to BioLiP]