Structure of PDB 4k8k Chain A

Receptor sequence
>4k8kA (length=331) Species: 347834 (Rhizobium etli CFN 42) [Search protein sequence]
SMTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSR
MGPALEASGGSAGNTAAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGV
HYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVAD
AKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGE
FLDLMRSGKVDIVFANRQEALSLYQTDDFEEALNRIAADCKIAAVTMSEN
GAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGK
LGCLAAGIVIQQIGPRPMTSLSEAAKQAGLI
3D structure
PDB4k8k Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 1-(4-methoxyphenyl)-1-cyclopropane and 2-aminoperimidine
ChainA
Resolution1.5 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R123 G273 A274 G275 D276
Catalytic site (residue number reindexed from 1) R126 G276 A277 G278 D279
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADN A N9 I11 D13 M33 G56 G57 S58 N61 M125 T127 E154 Y156 T272 D276 P312 N12 I14 D16 M36 G59 G60 S61 N64 M128 T130 E157 Y159 T275 D279 P315
BS02 1PJ A A38 A41 E42 Y45 P109 R112 M114 Y128 A41 A44 E45 Y48 P112 R115 M117 Y131
BS03 1PK A A81 D82 D86 A84 D85 D89
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016301 kinase activity
GO:0016772 transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0016310 phosphorylation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4k8k, PDBe:4k8k, PDBj:4k8k
PDBsum4k8k
PubMed
UniProtQ2KDX6

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