Structure of PDB 4jym Chain A

Receptor sequence
>4jymA (length=267) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
GVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDN
MGAGTTNPDYFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIG
VLASLNRPDLFSKIVMISASPRYVNDVDYQGGFEQEDLNQLFEAIRSNYK
AWCLGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIALSVGQTIFQSDMRQI
LPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLPQLS
SPDSVIPVILRHIRNDI
3D structure
PDB4jym Smoke-derived karrikin perception by the alpha/beta-hydrolase KAI2 from Arabidopsis.
ChainA
Resolution1.35 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) F26 S95 V96 K216
Catalytic site (residue number reindexed from 1) F25 S94 V95 K215
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KKN A Y124 F134 F157 F194 A219 Y123 F133 F156 F193 A218 PDBbind-CN: -logKd/Ki=5.04,Kd=9.05uM
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0016787 hydrolase activity
Biological Process
GO:0009640 photomorphogenesis
GO:0009704 de-etiolation
GO:0080167 response to karrikin
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol

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Biological Process
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Cellular Component
External links
PDB RCSB:4jym, PDBe:4jym, PDBj:4jym
PDBsum4jym
PubMed23613584
UniProtQ9SZU7|KAI2_ARATH Probable esterase KAI2 (Gene Name=KAI2)

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