Structure of PDB 4jqo Chain A

Receptor sequence
>4jqoA (length=338) Species: 216895 (Vibrio vulnificus CMCP6) [Search protein sequence]
QSNAMAFNLRNRNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLG
KNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTAR
VLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTM
LEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPD
EELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWD
ERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGM
KGLEVTEEVFESEHSIVFDEAENRMHTIKAVMVATLGS
3D structure
PDB4jqo Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
ChainA
Resolution2.082 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R59 T60 D87 R108 H135 Q138 D233 C275 R320
Catalytic site (residue number reindexed from 1) R63 T64 D91 R112 H139 Q142 D237 C279 R324
Enzyme Commision number 2.1.3.3: ornithine carbamoyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CIR A H135 Q138 N169 D233 S237 M238 C275 L276 R320 H139 Q142 N173 D237 S241 M242 C279 L280 R324
Gene Ontology
Molecular Function
GO:0004585 ornithine carbamoyltransferase activity
GO:0016597 amino acid binding
GO:0016740 transferase activity
GO:0016743 carboxyl- or carbamoyltransferase activity
Biological Process
GO:0006520 amino acid metabolic process
GO:0006526 L-arginine biosynthetic process
GO:0006591 ornithine metabolic process
GO:0019240 citrulline biosynthetic process
GO:0042450 arginine biosynthetic process via ornithine
Cellular Component
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:4jqo, PDBe:4jqo, PDBj:4jqo
PDBsum4jqo
PubMed
UniProtQ8DCF5|OTC_VIBVU Ornithine carbamoyltransferase (Gene Name=argF)

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