Structure of PDB 4je0 Chain A

Receptor sequence
>4je0A (length=311) Species: 548473 (Staphylococcus aureus subsp. aureus TCH60) [Search protein sequence]
KNVNDLITSNTTLTVVDADKNNKIVPAQDYLALKSQIKVDDKVKSGDYFT
IKYSDTVQVYGLNPEDIKNIGDIKDPNNGETIATAKHDTANNLITYTFTD
YVDRFNSVQMGINYSIYMDADTIPVSKNDVEFNVTIGNDTTKTTANIQYP
DYVSRDNNSIGSAFTETVSHAGNAEDPGYYKQTVYVNPSEKSLTNAKLKV
EAYHKDYPDNVGQINKDVTKIKIYQAPKDYVLNKGYDVNTNQLIDVTEQF
KDKITYGANDSVNVDFGSINNSYVVMVDTKFEYTTSESPTLVQMATLTSD
GNRSVSTGNAA
3D structure
PDB4je0 Structures of SdrD from Staphylococcus aureus reveal the molecular mechanism of how the cell surface receptors recognize their ligands
ChainA
Resolution1.7 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D17 D19 N21 K23 D29 D17 D19 N21 K23 D29
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Mar 4 17:15:33 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4je0', asym_id = 'A', title = 'Structures of SdrD from Staphylococcus aureus re...e cell surface receptors recognize their ligands '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4je0', asym_id='A', title='Structures of SdrD from Staphylococcus aureus re...e cell surface receptors recognize their ligands ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005618,0007155', uniprot = '', pdbid = '4je0', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005618,0007155', uniprot='', pdbid='4je0', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>