Structure of PDB 4j8r Chain A

Receptor sequence

>4j8rA (length=209) Species: 10090 (Mus musculus) [Search protein sequence]

DIVMTQSHKFMSTSVGDRVSITCKASQVGTALAWYQQKPGQSPKLLIYWA
STRHTGVPDRFTGSGSGTDFTLTISNVQSEDLSDYFCQQYSSYPTFGGGT
KLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDG
SERQNGVLNSETDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST
SPIVKSFNR

3D structure

PDB

4j8r The crystal structure of an octapeptide repeat of the Prion protein in complex with a Fab fragment of the POM2 antibody.

Chain

Resolution

2.303 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	W49 Y90	W49 Y90

External links

PDB	RCSB:4j8r, PDBe:4j8r, PDBj:4j8r
PDBsum	4j8r
PubMed	23629842

[Back to BioLiP]