Structure of PDB 4j1j Chain A

Receptor sequence
>4j1jA (length=233) Species: 999729 (Leanyer virus) [Search protein sequence]
TGPDFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKKA
KDSLKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGYL
AKWCFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPGAEM
FLKDFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVTA
IQSAVKVVAKLPWAKAGFTAAAKNFLAKFNISV
3D structure
PDB4j1j Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
ChainA
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A L47 H49 K50 K53 N78 H79 T94 L95 H96 R97 V125 P127 L128 E130 M174 F178 K181 K184 L45 H47 K48 K51 N76 H77 T92 L93 H94 R95 V123 P125 L126 E128 M172 F176 K179 K182 PDBbind-CN: Kd=0.505uM
BS02 dna A P13 R84 P11 R82 PDBbind-CN: Kd=0.505uM
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4j1j, PDBe:4j1j, PDBj:4j1j
PDBsum4j1j
PubMed23569220
UniProtF2WAD7

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