Structure of PDB 4j1g Chain A

Receptor sequence
>4j1gA (length=228) Species: 999729 (Leanyer virus) [Search protein sequence]
DFIYDDRPAAVSSTFNPEKGYMDFITAYGKNINADNVRIFFLNHKKAKDS
LKGSPKVEVDLQFGTLRVKVVNNHNPRNRDNPVADNAITLHRLSGYLAKW
CFDEIDHGQIEEAEVKSKVVIPLAEAKGCKWGDGVALYLAFAPGAEMFLK
DFEFYPLAIDIQRVVKDGMDITFMRKVLKQRYGTKTADDWMISEVTAIQS
AVKVVAKLPWAKAGFTAAAKNFLAKFNI
3D structure
PDB4j1g Structure of the Leanyer orthobunyavirus nucleoprotein-RNA complex reveals unique architecture for RNA encapsidation.
ChainA
Resolution2.789 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A V16 S17 S18 F20 N21 P22 K53 N78 H79 R84 V88 T94 R97 V125 P127 L128 E130 A131 R168 M174 F178 K181 K184 Q185 R186 A218 V11 S12 S13 F15 N16 P17 K48 N73 H74 R79 V83 T89 R92 V120 P122 L123 E125 A126 R163 M169 F173 K176 K179 Q180 R181 A213 PDBbind-CN: Kd=0.166uM
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4j1g, PDBe:4j1g, PDBj:4j1g
PDBsum4j1g
PubMed23569220
UniProtF2WAD7

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