Structure of PDB 4h10 Chain A
Receptor sequence
>4h10A (length=60) Species:
9606
(Homo sapiens) [
Search protein sequence
]
RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA
VQHMKTLRGA
3D structure
PDB
4h10
Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA.
Chain
A
Resolution
2.402 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
A
H77 S78 E81 R85 D110 K111
H9 S10 E13 R17 D42 K43
PDBbind-CN
: Kd=1.52uM
BS02
dna
A
I80 E81 R84
I12 E13 R16
PDBbind-CN
: Kd=1.52uM
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0046983
protein dimerization activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
GO:0005667
transcription regulator complex
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4h10
,
PDBe:4h10
,
PDBj:4h10
PDBsum
4h10
PubMed
23229515
UniProt
O00327
|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein 1 (Gene Name=BMAL1)
[
Back to BioLiP
]