Structure of PDB 4gyc Chain A

Receptor sequence
>4gycA (length=220) Species: 2257 (Natronomonas pharaonis) [Search protein sequence]
VGLTTLFWLGAIGMLVGTLAFAWAGRDAGSGERRYYVTLVGISGIAAVAY
VVMALGVGWVPVAERTVFAPRYINWILTTPLIVYFLGLLAGLDSREFGIV
ITLNTVVMLAGFAGAMVPGIERYALFGMGAVAFLGLVYYLVGPMTESASQ
RSSGIKSLYVRLRNLTVILWAIYPFIWLLGPPGVALLTPTVDVALIVYLD
LVTKVGFGFIALDAAATLRA
3D structure
PDB4gyc Ground state structure of D75N mutant of sensory rhodopsin II in complex with its cognate transducer.
ChainA
Resolution2.0501 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RET A W76 T80 V108 M109 G112 F127 F134 W171 Y174 P175 W178 T204 K205 W75 T79 V107 M108 G111 F126 F133 W170 Y173 P174 W177 T203 K204
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0005515 protein binding
GO:0009881 photoreceptor activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0007602 phototransduction
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4gyc, PDBe:4gyc, PDBj:4gyc
PDBsum4gyc
PubMed23619282
UniProtP42196|BACS2_NATPH Sensory rhodopsin-2 (Gene Name=sop2)

[Back to BioLiP]