Structure of PDB 4g0p Chain A

Receptor sequence
>4g0pA (length=147) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
SNKKMINGGTVNNWICINFSRQVQDNLARTFCQELAQMCYVSGMAFNPEP
VLPPVSARPEQVEKVLKTRYHDATSKLSQGKEIDLLIVILPDNNGSLYGD
LKRICETELGIVSQCCLTKHVFKMSKQYMANVALKINVKVGGRNTVL
3D structure
PDB4g0p Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 U5P A Y691 K695 Q707 C708 K728 K732 Y98 K102 Q114 C115 K135 K139 MOAD: Kd=0.98mM
PDBbind-CN: -logKd/Ki=3.01,Kd=0.98mM
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:4g0p, PDBe:4g0p, PDBj:4g0p
PDBsum4g0p
PubMed22850669
UniProtO04379|AGO1_ARATH Protein argonaute 1 (Gene Name=AGO1)

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