Structure of PDB 4fmi Chain A

Receptor sequence
>4fmiA (length=270) Species: 493803 (Merkel cell polyomavirus) [Search protein sequence]
EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSP
DQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDM
KRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIET
VLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQT
GSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGK
MALHGLPRYFNVTLRKRWVK
3D structure
PDB4fmi Structures of Merkel Cell Polyomavirus VP1 Complexes Define a Sialic Acid Binding Site Required for Infection.
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA A W76 Y81 D82 K295 S297 K299 W36 Y41 D42 K246 S248 K250
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:4fmi, PDBe:4fmi, PDBj:4fmi
PDBsum4fmi
PubMed22910713
UniProtC0JPK1

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