Structure of PDB 4fe1 Chain A
Receptor sequence
>4fe1A (length=740) Species:
197221
(Thermosynechococcus vestitus BP-1) [
Search protein sequence
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RVVVDNDPVPTSFEKWAKPGHFDRTLARGPQTTTWIWNLHALAHDFDTHT
SDLEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFSNYEAWLADPTGIKP
SAQVVWPIVGQGILNGDVGGGFHGIQITSGLFQLWRASGITNEFQLYCTA
IGGLVMAGLMLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAW
AGHQIHVSLPINKLLDAGVAAKDIPLPHEFILNPSLMAELYPKVDWGFFS
PFFTFNWAAYSDFLTFNGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMY
RTNWGIGHSLKEILEAHKGPFTGAGHKGLYEVLTTSWHAQLAINLAMMGS
LSIIVAQHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFLVVGGAAHGAIF
MVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHSFGLYVHNDTM
RAFGRPQDMFSDTGIQLQPVFAQWVQNLHTLAPGGTAPNAAATASVAFGG
DVVAVGGKVAMMPIVLGTADFMVHHIHAFTIHVTVLILLKGVLFARSSRL
IPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISVVIFHFSW
KMQSDVWGTVAPDGTVSHITGGNFAQSAITINGWLRDFLWAQASQVIGSY
GSALSAYGLLFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAP
AIQPRALSIIQGRAVGVAHYLLGGIATTWAFFLARIISVG
3D structure
PDB
4fe1
Improving the accuracy of macromolecular structure refinement at 7 A resolution.
Chain
A
Resolution
4.9228 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CLA
A
Y459 I541 Y603 N604 S607 V608 F611 W649 L654 F676 H680 W683 Y735 T742 T743 F746
Y444 I526 Y588 N589 S592 V593 F596 W634 L639 F661 H665 W668 Y720 T727 T728 F731
BS02
CLA
A
F456 V460 F544 W601 N604 I646
F441 V445 F529 W586 N589 I631
BS03
CLA
A
A684 F685 L687 M688 Y696 W697
A669 F670 L672 M673 Y681 W682
BS04
CLA
A
W28 H33 F34 A55 H56 G78
W16 H21 F22 A43 H44 G66
BS05
CLA
A
H56 F58 I72 A75 H76 H79 V83 F84 L87 W352 H353 L356 N359
H44 F46 I60 A63 H64 H67 V71 F72 L75 W337 H338 L341 N344
BS06
CLA
A
H56 H79 W86
H44 H67 W74
BS07
CLA
A
W86 G89 F92 H93 F97 W118 L166
W74 G77 F80 H81 F85 W106 L154
BS08
CLA
A
W86 M90 Q115 I137 Q138 I139 S141 A671 Y672
W74 M78 Q103 I125 Q126 I127 S129 A656 Y657
BS09
CLA
A
Q115 V116 V117 W118 Q123 L126 L674
Q103 V104 V105 W106 Q111 L114 L659
BS10
CLA
A
V14 F77 L171 A175 F178 H179 W189
V2 F65 L159 A163 F166 H167 W177
BS11
CLA
A
T23 F25 K27 W28 H33 K71 S74 L173 G176 W177 Y180 H181
T11 F13 K15 W16 H21 K59 S62 L161 G164 W165 Y168 H169
BS12
CLA
A
R13 W189 H199 W319
R1 W177 H187 W304
BS13
CLA
A
F73 H76 L80 F84 M172 W189 N192 M196 H199 H200 G203 L204
F61 H64 L68 F72 M160 W177 N180 M184 H187 H188 G191 L192
BS14
CLA
A
Q157 T161 A211 W212 H215 V219 P239
Q145 T149 A199 W200 H203 V207 P227
BS15
CLA
A
A211 I217 H218 W258 G259 F260 Y275 F278 L302
A199 I205 H206 W246 G247 F248 Y260 F263 L287
BS16
CLA
A
F156 C160 I163 H240 I243 L244
F144 C148 I151 H228 I231 L232
BS17
CLA
A
W272 L279 F281 H299 L302 A303 V306 N504
W257 L264 F266 H284 L287 A288 V291 N489
BS18
CLA
A
F281 G283 L292 D296 T297 H299 H300 I304 H373 M377 A509
F266 G268 L277 D281 T282 H284 H285 I289 H358 M362 A494
BS19
CLA
A
L205 G208 S209 W212 H300 H301 L366 V370 M374 P379 Y380
L193 G196 S197 W200 H285 H286 L351 V355 M359 P364 Y365
BS20
CLA
A
N198 H199 A202 G203 L207 H313 T317 W319 I321
N186 H187 A190 G191 L195 H298 T302 W304 I306
BS21
CLA
A
L201 F308 A311 M314 Y315 M362
L189 F293 A296 M299 Y300 M347
BS22
CLA
A
I310 H313 M314 I321 G322 H323
I295 H298 M299 I306 G307 H308
BS23
CLA
A
H323 A331 H332
H308 A316 H317
BS24
CLA
A
H341 L344 V429 L430
H326 L329 V414 L415
BS25
CLA
A
F190 Q191 V193 M196 L197 H200 L348 T349 W352 Q355 I358 N359 M362 M363
F178 Q179 V181 M184 L185 H188 L333 T334 W337 Q340 I343 N344 M347 M348
BS26
CLA
A
I368 Q372 V405 I546 T549 V550
I353 Q357 V390 I531 T534 V535
BS27
CLA
A
M362 I369 H373 M377 S510 F513
M347 I354 H358 M362 S495 F498
BS28
CLA
A
W86 T140 S141 T395 H396 W399 I400 I740 W744
W74 T128 S129 T380 H381 W384 I385 I725 W729
BS29
CLA
A
L143 L146 M363 L366 S367 V370 M374 Y380 H396 H397
L131 L134 M348 L351 S352 V355 M359 Y365 H381 H382
BS30
CLA
A
H52 A53 L54 A55 H56 D57 L356 L360 F403 G407 H411 F574 R575 W592
H40 A41 L42 A43 H44 D45 L341 L345 F388 G392 H396 F559 R560 W577
BS31
CLA
A
F336 V429 R432 V433 H436 I440
F321 V414 R417 V418 H421 I425
BS32
CLA
A
W446 F450 F453 H454
W431 F435 F438 H439
BS33
CLA
A
F453 H454 H461 M465 R470
F438 H439 H446 M450 R455
BS34
CLA
A
H494 A497 T501 A502
H479 A482 T486 A487
BS35
CLA
A
F281 T501 P503
F266 T486 P488
BS36
CLA
A
Q372 Y375 F486 A487 V490 Q491 I529 H539 H542 H612
Q357 Y360 F471 A472 V475 Q476 I514 H524 H527 H597
BS37
CLA
A
F450 L451 P484 V485 F486 A487 F536 H540
F435 L436 P469 V470 F471 A472 F521 H525
BS38
CLA
A
I440 L444 V447 H547
I425 L429 V432 H532
BS39
CLA
A
I704 H708
I689 H693
BS40
CLA
A
T45 I48 W49 H708 P719
T33 I36 W37 H693 P704
BS41
CLA
A
I682 F685 L722 V730 H734
I667 F670 L707 V715 H719
BS42
CLA
A
F268 F270
F253 F255
BS43
CLA
A
A331 H332 K333 P335
A316 H317 K318 P320
BS44
PQN
A
M688 F689 S692 R694 W697 A721 L722 G727
M673 F674 S677 R679 W682 A706 L707 G712
BS45
SF4
A
C578 C587 I724
C563 C572 I709
BS46
CLA
A
L650 W655
L635 W640
BS47
CLA
A
L674 L677 G678 H680 F681 A684
L659 L662 G663 H665 F666 A669
BS48
CLA
A
N445 C448 I449 F453 F544 V548 I552 F600 W601
N430 C433 I434 F438 F529 V533 I537 F585 W586
BS49
CLA
A
A467 F468
A452 F453
BS50
CLA
A
K710 L711
K695 L696
BS51
CLA
A
I48 H52
I36 H40
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009522
photosystem I
GO:0009579
thylakoid
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
GO:0042651
thylakoid membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4fe1
,
PDBe:4fe1
,
PDBj:4fe1
PDBsum
4fe1
PubMed
22681901
UniProt
P0A405
|PSAA_THEVB Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)
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