Structure of PDB 4dth Chain A

Receptor sequence
>4dthA (length=356) Species: 666 (Vibrio cholerae) [Search protein sequence]
ATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSAQGDALFMLT
KDMNQGSYQRPPSLQDGKNYQNWQTHTVELVSYPCEMDDKAAVETRKQAM
LWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAES
QGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFAS
LTSAENLDDKELAANVFAYLTSIYLKTAELAKKFGIYINEWDPMSEQITP
NANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYS
ESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQS
YLPKTE
3D structure
PDB4dth Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ATP and Mg++
ChainA
Resolution1.78 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A F4 S12 G14 I15 S81 P83 K260 R268 I321 L337 F5 S13 G15 I16 S82 P84 K261 R269 I322 L338
BS02 MG A E16 Q162 E339 E17 Q163 E340
BS03 MG A E16 E78 E17 E79
Gene Ontology
Biological Process
GO:0007015 actin filament organization

View graph for
Biological Process
External links
PDB RCSB:4dth, PDBe:4dth, PDBj:4dth
PDBsum4dth
PubMed
UniProtA0A0H3AIG7|VGRG1_VIBC3 Actin cross-linking toxin VgrG1 (Gene Name=vgrG1)

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