Structure of PDB 4db4 Chain A

Receptor sequence
>4db4A (length=256) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLC
SILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGM
DFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRE
LEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSC
IKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSPIGKA
MFEIRD
3D structure
PDB4db4 Structural basis for RNA-duplex recognition and unwinding by the DEAD-box helicase Mss116p.
ChainA
Resolution3.599 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A T382 V383 G408 R415 T433 V435 S535 T42 V43 G68 R75 T93 V95 S195
BS02 rna A R538 S539 R198 S199
BS03 rna A G408 Q412 R415 G68 Q72 R75
External links
PDB RCSB:4db4, PDBe:4db4, PDBj:4db4
PDBsum4db4
PubMed22940866
UniProtP15424|MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial (Gene Name=MSS116)

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