Structure of PDB 4d72 Chain A

Receptor sequence
>4d72A (length=586) Species: 406556 (Streptococcus pneumoniae SP3-BS71) [Search protein sequence]
EVDKRREINNEHPLLMMPLYANGEEFNQGKYTFWGGDTLTGKWENIPDDL
KPYTVIQLHPDDLPKRDGAARDFYEHMLEEAAKYVNPKTGKNEPIPVILT
VYTAGNMPYHTSAHWLSTSWIDKMYQKYPNLHGIFSTASYWIWANDIENK
AADYLKVSAKNGGYFIWAEQNSGSAIEKAFGKNGKIAFQKSVDKYWKNLI
FMFKNTPAAEGNDSTTESYMKGLWLSNHTYQWGGLMDTWKWYETGKWKLF
ASGNIGKSQGDRQWLTEPESMLGEEALGVYLNGGVVYNFEHPAYTYGVNN
KESLLFSEVIKEFFRYVIAHPAPSKEKVLEDTKVFIHGDYSNKGNGKFFV
NVNTDREQTPLYMTGRYNVIPAIPGVLKTDKLKESVSSSRIQIKEITSPE
FSSTQARKEYLNKLYPMNYEGDIFAQKLDNRWFVYNYKVNENVKQTGKLK
FNSLEMNVEFEPHTYGIFERISNGLKVNLNNFRTNKDSLWSNAQDANQAK
KLPQLTKKGAIKWIEEHYIKDTQFGEKRVTKIVLRGIDKLPTIHSLSGTN
NSYDQPSLNFDQKNHMVTITINSNGNLEFELHFLEH
3D structure
PDB4d72 Towards Efficient Enzymes for the Generation of Universal Blood Through Structure-Guided Directed Evolution.
ChainA
Resolution2.11 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.102: blood-group-substance endo-1,4-beta-galactosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL A W659 Y662 E663 W239 Y242 E243
BS02 FUC A Y440 H479 T523 E710 Y20 H59 T103 E290
Gene Ontology
Molecular Function
GO:0033929 blood-group-substance endo-1,4-beta-galactosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4d72, PDBe:4d72, PDBj:4d72
PDBsum4d72
PubMed25870881
UniProtA0A0H2UKY4

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