Structure of PDB 4d1y Chain A

Receptor sequence
>4d1yA (length=175) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence]
MAKKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTKEIKTNSGMV
LIVDDVIANLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTF
GEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEI
DGNFFTAQDENTIWTMLPKVIEALK
3D structure
PDB4d1y Structure and Stability of an Unusual Zinc-Binding Protein from Bacteroides Thetaiotaomicron.
ChainA
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RBF A N161 W164 N161 W164 PDBbind-CN: -logKd/Ki=7.13,Kd=74nM
BS02 ZN A C74 C111 C74 C111
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4d1y, PDBe:4d1y, PDBj:4d1y
PDBsum4d1y
PubMed25263158
UniProtQ8A8A4|PPBAT_BACTN Protein ppBat (Gene Name=BT_1263)

[Back to BioLiP]