Structure of PDB 4d1d Chain A

Receptor sequence
>4d1dA (length=456) Species: 33918 (Microbacterium maritypicum) [Search protein sequence]
SLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQ
VIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLK
ALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYG
ITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFS
TAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGM
VPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLAT
WSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLN
TFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWV
ALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAES
RNEDYL
3D structure
PDB4d1d Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
ChainA
Resolution3.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 5NL A Q42 A44 A48 W117 F216 G219 W220 N318 Q32 A34 A38 W107 F206 G209 W210 N308
BS02 5ND A Q42 A48 W117 Q121 F216 G219 W220 N318 Q32 A38 W107 Q111 F206 G209 W210 N308 PDBbind-CN: -logKd/Ki=5.74,Kd=1.8uM
BS03 NA A A38 M39 I41 A309 S312 T313 A28 M29 I31 A299 S302 T303
Gene Ontology
Molecular Function
GO:0015205 nucleobase transmembrane transporter activity
GO:0022857 transmembrane transporter activity
GO:0046872 metal ion binding
Biological Process
GO:0015851 nucleobase transport
GO:0055085 transmembrane transport
GO:0071705 nitrogen compound transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4d1d, PDBe:4d1d, PDBj:4d1d
PDBsum4d1d
PubMed24952894
UniProtD6R8X8|HYUP_MICLQ Hydantoin permease (Gene Name=hyuP)

[Back to BioLiP]