Structure of PDB 4bxd Chain A

Receptor sequence
>4bxdA (length=255) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence]
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIP
APHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEI
VNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIA
VGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLE
AFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALN
EKYPA
3D structure
PDB4bxd Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
ChainA
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.28: N-acetylmuramoyl-L-alanine amidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A A43 R76 W78 H79 G81 N92 R153 A43 R76 W78 H79 G81 N92 R153
BS02 ZN A H25 H146 H25 H146
Gene Ontology
Molecular Function
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0009253 peptidoglycan catabolic process
GO:0009254 peptidoglycan turnover
GO:0071555 cell wall organization
Cellular Component
GO:0009276 Gram-negative-bacterium-type cell wall
GO:0019867 outer membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4bxd, PDBe:4bxd, PDBj:4bxd
PDBsum4bxd
PubMed23931161
UniProtQ9I5D1

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