Structure of PDB 4blv Chain A

Receptor sequence
>4blvA (length=280) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQL
GSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGS
PLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKA
KLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVL
RQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLE
QQMNNVLPWLHSKLVPAGTGHATVSWIVPE
3D structure
PDB4blv Structural and Functional Insights Into the Molecular Mechanism of Rrna M6A Methyltransferase Rlmj.
ChainA
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.1.1.266: 23S rRNA (adenine(2030)-N(6))-methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAM A Y4 H6 H19 H42 A43 G99 S100 E118 L119 D143 G144 D164 Y4 H6 H19 H42 A43 G99 S100 E118 L119 D143 G144 D164
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0008649 rRNA methyltransferase activity
GO:0008988 rRNA (adenine-N6-)-methyltransferase activity
GO:0036307 23S rRNA (adenine(2030)-N(6))-methyltransferase activity
Biological Process
GO:0006364 rRNA processing
GO:0015976 carbon utilization
GO:0032259 methylation
GO:0070475 rRNA base methylation
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4blv, PDBe:4blv, PDBj:4blv
PDBsum4blv
PubMed23945937
UniProtP37634|RLMJ_ECOLI Ribosomal RNA large subunit methyltransferase J (Gene Name=rlmJ)

[Back to BioLiP]