Structure of PDB 4aw7 Chain A

Receptor sequence
>4aw7A (length=565) Species: 310297 (Phocaeicola plebeius) [Search protein sequence]
HMASVDYNTRRFLSGVSELDRSKYFNIHSTSDDDKDVGKFLADYQVGLGR
KFWGPYSYAYNKTHEVGKYPQMKPYSGNISVKRYIATEHPYVQHIQGGID
VQAAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVD
FYASIGKHIHNNPRLNGKMKVIGYAAAYPAWEDGNFNYWNTRMKMFIDRA
GAYMDGFSVHLYDGITKRSGSNSEAVLDMVEAYSYIKFGHVKPLAISEFG
GIDNKPDDSYDDISSVRSVSSFNHFLFNLMERQDNLFISIPFVSDKAEWH
ITAANNYTSYSAALFIPDNPQNLKNTTWRLNDKKYFFELWKNVKGERVDI
TSSNPDIQVQAFKDGGRLYIALDNLDDNPQTVYLNNKNSWKDVSNVTKRS
LYVNYNAGIEYTEQNVPSMPESISIVPNQTIVLVADVSSAFTNSIIRNKY
YSSEYLKPISAGSSLSFPFTGIESGSGRASLRMSIGRPVSASKKPVVKIN
GTAVSVPDNWKGYGQSNRNIFFGMIEVPFDIQLLKNGDNNVDITFSDGGG
HVSSMILQVEKYTVS
3D structure
PDB4aw7 Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.
ChainA
Resolution1.33 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.178: beta-porphyranase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLA A N151 E152 Y237 E279 F324 N126 E127 Y212 E248 F292
BS02 L6S A H53 F77 F324 S326 W331 Y342 H28 F52 F292 S294 W299 Y310
BS03 GAL A F77 H114 W331 F52 H89 W299
BS04 L6S A W78 Y83 N86 K87 W53 Y58 N61 K62
BS05 CA A D388 N542 W543 G545 D356 N509 W510 G512
BS06 GAL A N151 E152 Y237 E279 F324 N126 E127 Y212 E248 F292
External links
PDB RCSB:4aw7, PDBe:4aw7, PDBj:4aw7
PDBsum4aw7
PubMed23150581
UniProtB5CY96|PORA_PHOPM Beta-porphyranase A (Gene Name=BACPLE_01693)

[Back to BioLiP]