Structure of PDB 4a0k Chain A
Receptor sequence
>4a0kA (length=719) Species:
9606
(Homo sapiens) [
Search protein sequence
]
KKLVIKNFRDRPRLPDNYTQDTWRKLHEAVRAVQSSTSIRYNLEELYQAV
ENLCSHKVSPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQ
DHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQS
KTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQVYKDSFELKFLEETN
CLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACV
EKQLLGEHLTAILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHW
SEYIKTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLM
KESFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELERTLDKIMILF
RFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK
LEGMFKDMELSKDIMVHFKQHMQNQSDSGPIDLTVNILTMGYWPTYTPME
VHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQ
VSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLI
KSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQ
DRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLI
DRDYMERDKDNPNQYHYVA
3D structure
PDB
4a0k
The Molecular Basis of Crl4(Ddb2/Csa) Ubiquitin Ligase Architecture, Targeting, and Activation.
Chain
A
Resolution
5.93 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
peptide
A
D522 L523 T524 N526 I527 L528 T529 M530 M547 L550 K566 L567 Q568 W569 Q570 L573 H575 A576 V577 L578 K579 A580 E581 L599 N603 F656
D482 L483 T484 N486 I487 L488 T489 M490 M507 L510 K526 L527 Q528 W529 Q530 L533 H535 A536 V537 L538 K539 A540 E541 L559 N563 F616
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0031625
ubiquitin protein ligase binding
GO:0061630
ubiquitin protein ligase activity
GO:0160072
ubiquitin ligase complex scaffold activity
Biological Process
GO:0000082
G1/S transition of mitotic cell cycle
GO:0001701
in utero embryonic development
GO:0006281
DNA repair
GO:0006511
ubiquitin-dependent protein catabolic process
GO:0006974
DNA damage response
GO:0007283
spermatogenesis
GO:0008283
cell population proliferation
GO:0008284
positive regulation of cell population proliferation
GO:0016567
protein ubiquitination
GO:0030097
hemopoiesis
GO:0030853
negative regulation of granulocyte differentiation
GO:0034644
cellular response to UV
GO:0035019
somatic stem cell population maintenance
GO:0042110
T cell activation
GO:0042254
ribosome biogenesis
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045732
positive regulation of protein catabolic process
GO:0048511
rhythmic process
GO:0051246
regulation of protein metabolic process
GO:0097193
intrinsic apoptotic signaling pathway
GO:0140627
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway
GO:1900087
positive regulation of G1/S transition of mitotic cell cycle
GO:2000001
regulation of DNA damage checkpoint
GO:2000819
regulation of nucleotide-excision repair
Cellular Component
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005737
cytoplasm
GO:0031461
cullin-RING ubiquitin ligase complex
GO:0031464
Cul4A-RING E3 ubiquitin ligase complex
GO:0080008
Cul4-RING E3 ubiquitin ligase complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4a0k
,
PDBe:4a0k
,
PDBj:4a0k
PDBsum
4a0k
PubMed
22118460
UniProt
Q13619
|CUL4A_HUMAN Cullin-4A (Gene Name=CUL4A)
[
Back to BioLiP
]