Structure of PDB 3wya Chain A

Receptor sequence
>3wyaA (length=396) Species: 70601 (Pyrococcus horikoshii OT3) [Search protein sequence]
KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPKFAWVMDRLKEEHTKFETP
HRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLA
RTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGYKDFPVIPTS
AWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSI
KGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQ
EALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLN
HPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGD
SAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQKG
3D structure
PDB3wya Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha.
ChainA
Resolution2.35 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) D17 K20 S21 H93
Catalytic site (residue number reindexed from 1) D13 K16 S17 H62
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP A D17 G19 K20 S21 T22 N144 K145 D147 M148 S181 W183 D13 G15 K16 S17 T18 N113 K114 D116 M117 S150 W152
Gene Ontology
Molecular Function
GO:0003746 translation elongation factor activity
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0006412 translation
GO:0006414 translational elongation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3wya, PDBe:3wya, PDBj:3wya
PDBsum3wya
PubMed25428348
UniProtO59153|EF1A_PYRHO Elongation factor 1-alpha (Gene Name=tuf)

[Back to BioLiP]