Structure of PDB 3wdr Chain A

Receptor sequence
>3wdrA (length=330) Species: 356864 (Symbiotic protist of Reticulitermes speratus) [Search protein sequence]
QDWNISSSPVTPSPSAGAQKLYSFLVQNFQKKIISGAMTLQGGDESAQTK
EPDWLQQNAGHRPALVGLDFMFQTGKGEEWYYNDSRFSKQVVNGAKSYWQ
KGGIPALCWHWRDPSKDTDAFYSPSSGNSATQFDADQAVKSGTAENKAIL
QDLAVIADQLQDLRDAGVAVLWRPLHEASGKWFWWGYKGADALKKLWKIE
FDYFVKERNLNNLIWVFTAGTPIEGIADWYPGDDMVDVIGMDIYATQGDH
ATQQDYFNQCKSIFKGRKIVAMSECGSVPEPDLAAPWSFFMPWYNNYCIP
EGSNPYNSLEFWKKTMSSSLVITLDNMPGW
3D structure
PDB3wdr Structural and Biochemical Analyses of Glycoside Hydrolase Family 26 beta-Mannanase from a Symbiotic Protist of the Termite Reticulitermes speratus
ChainA
Resolution1.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.78: mannan endo-1,4-beta-mannosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A X85 W307 Y308 X71 W293 Y294
BS02 BGC A X85 R126 F135 X71 R112 F121
BS03 BGC A F86 E92 F72 E78
BS04 MAN A Q41 F43 K45 Q27 F29 K31
BS05 BMA A X85 F86 R126 X71 F72 R112
BS06 BMA A X85 W307 Y308 X71 W293 Y294
BS07 BCT A H124 H190 E288 H110 H176 E274
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016985 mannan endo-1,4-beta-mannosidase activity
Biological Process
GO:0006080 substituted mannan metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3wdr, PDBe:3wdr, PDBj:3wdr
PDBsum3wdr
PubMed24570006
UniProtH7CGE2

[Back to BioLiP]