Structure of PDB 3waz Chain A

Receptor sequence

>3wazA (length=216) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence]

EASVSFENGKIVVRLPITRPTSKIRVKKIENGVGIPVSTRKKSFPSDENL
RDYYIEWQISYARDGKYDYELSRMVRLAHEHGILTYNDIYELLKFADDVK
SYLEDKGIRRESTNEELYGFNIYEDVYPVAKKELPSGEFIGIVLKHAQRA
VGYQSMVYVCIPLTNVEPSLAGRVARRNEVVKYEVPVDLMKELLKAFIIA
SETHKNDIVKFLRSII

3D structure

PDB

3waz A sequence-specific DNA glycosylase mediates restriction-modification in Pyrococcus abyssi.

Chain

Resolution

3.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	A	T25 P27 S45 T46 R47 R184 N185	T18 P20 S38 T39 R40 R177 N178
BS02	dna	A	T28 S29 K30 R32 E63 Q65 S67 A69 A154 Q155 R156 A157 V158 Q161 M163 Y165	T21 S22 K23 R25 E56 Q58 S60 A62 A147 Q148 R149 A150 V151 Q154 M156 Y158
BS03	ADE	A	Q65 I66 Y68 M163 V164 F204 H211	Q58 I59 Y61 M156 V157 F197 H204

External links

PDB	RCSB:3waz, PDBe:3waz, PDBj:3waz
PDBsum	3waz
PubMed	24458096
UniProt	Q9V2B6

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