Structure of PDB 3vyk Chain A

Receptor sequence

>3vykA (length=128) Species: 10090 (Mus musculus) [Search protein sequence]

SCPKDWKPFVSHCYFILNDSKASWNESEEKCSHMGAHLVVIHSQAEQDFI
TSNLNTSAGYFIGLLDAGQRQWRWIDQTPYNKSATFWHKGEPNQDWERCV
IINHKTTGWGWNDIPCKDEHNSVCQVKK

3D structure

PDB

3vyk Recognition of Bisecting N-Acetylglucosamine: STRUCTURAL BASIS FOR ASYMMETRIC INTERACTION WITH THE MOUSE LECTIN DENDRITIC CELL INHIBITORY RECEPTOR 2

Chain

Resolution

1.5 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	A	E196 N198 E202 N217	E91 N93 E97 N112
BS02	CA	A	E196 N198 E202 N217 D218	E91 N93 E97 N112 D113

External links

PDB	RCSB:3vyk, PDBe:3vyk, PDBj:3vyk
PDBsum	3vyk
PubMed	24108122
UniProt	Q5YIR8

[Back to BioLiP]