Structure of PDB 3vdf Chain A

Receptor sequence
>3vdfA (length=335) Species: 9913 (Bos taurus) [Search protein sequence]
YTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADA
LNLDGGYIYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK
ANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFDEFFSQSC
APGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVA
FVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAV
APNHAVVSRSDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLF
NDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCS
3D structure
PDB3vdf Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution
ChainA
Resolution1.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A V382 T401 K404 C405 V41 T60 K63 C64
BS02 FE A D395 Y433 Y526 H595 D54 Y92 Y185 H254
BS03 CO3 A D395 T459 R463 T464 A465 G466 Y526 D54 T118 R122 T123 A124 G125 Y185
BS04 API A H588 L589 A590 Y665 H247 L248 A249 Y324
Gene Ontology
Cellular Component
GO:0005576 extracellular region

View graph for
Cellular Component
External links
PDB RCSB:3vdf, PDBe:3vdf, PDBj:3vdf
PDBsum3vdf
PubMed
UniProtP24627|TRFL_BOVIN Lactotransferrin (Gene Name=LTF)

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