Structure of PDB 3vca Chain A

Receptor sequence
>3vcaA (length=397) Species: 266834 (Sinorhizobium meliloti 1021) [Search protein sequence]
TSIHQRLDRRLSGFSLEQPFYTSPEVYALDLQHIFYKQWLYAVPVCQLAK
AGSYTTLRVGAYEVVIVRSRDGEVRAFHNSCRHRGSLICKARQGQVAKLV
CPYHQWTYELDGKLIWANDMGPDFDASKYGLKPVNLRNLDGLIYICLSDT
PPDFQTFAQLARPYLEVHDLKDAKVAFTSTIIEKGNWKLVWENNRECYHC
SSNHPALCRSFPLDPEVAGVGVSKKLQAHFDRCEAAGTPAQFVLAGDGQY
RLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPSTWNHFL
PDHSLTFRVMPISPTETEVTTTWLVHKDAVEGVDYDLKRLTEVWIATNDE
DREIVETNQQGILSPAYVPGPYSPGQESGVMQFVDWYAASLERALAP
3D structure
PDB3vca Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
ChainA
Resolution1.59 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) H109 E201 H204 H209 N357
Catalytic site (residue number reindexed from 1) H104 E196 H199 H204 N348
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FES A C86 H88 R89 C106 Y108 H109 W111 C81 H83 R84 C101 Y103 H104 W106
BS02 FE A H204 H209 D360 H199 H204 D351
BS03 PRO A T61 E68 L92 K95 R97 T56 E63 L87 K90 R92
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0044237 cellular metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3vca, PDBe:3vca, PDBj:3vca
PDBsum3vca
PubMed22224443
UniProtQ92ZP9

[Back to BioLiP]