Structure of PDB 3ufd Chain A

Receptor sequence
>3ufdA (length=76) Species: 211595 (Enterobacter sp. RFL1396) [Search protein sequence]
ESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIK
SLELIMKGLEVSDVVFFEMLIKEILK
3D structure
PDB3ufd The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.
ChainA
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R17 T23 Q24 R35 S39 R43 N44 R16 T22 Q23 R34 S38 R42 N43 PDBbind-CN: Kd=0.61nM
BS02 dna A L33 D34 T36 Y37 R46 N47 L48 T49 S52 L32 D33 T35 Y36 R45 N46 L47 T48 S51 PDBbind-CN: Kd=0.61nM
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3ufd, PDBe:3ufd, PDBj:3ufd
PDBsum3ufd
PubMed22941636
UniProtQ8GGH0

[Back to BioLiP]