Structure of PDB 3u0d Chain A

Receptor sequence
>3u0dA (length=175) Species: 9606 (Homo sapiens) [Search protein sequence]
TSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYA
TIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGL
TSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFI
RFSKSLGLPENHIVFPVPIDQCIDG
3D structure
PDB3u0d Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
ChainA
Resolution2.51 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DBH A S68 R72 W79 K134 S65 R69 W76 K131 PDBbind-CN: -logKd/Ki=10.00,Kd=0.101nM
BS02 DBH A W79 R81 L94 L103 Y106 K125 W76 R78 L91 L100 Y103 K122 PDBbind-CN: -logKd/Ki=10.00,Kd=0.101nM
BS03 DBH A Y106 K125 K134 Y103 K122 K131 PDBbind-CN: -logKd/Ki=10.00,Kd=0.101nM
Gene Ontology
Molecular Function
GO:0036094 small molecule binding

View graph for
Molecular Function
External links
PDB RCSB:3u0d, PDBe:3u0d, PDBj:3u0d
PDBsum3u0d
PubMed22928018
UniProtP80188|NGAL_HUMAN Neutrophil gelatinase-associated lipocalin (Gene Name=LCN2)

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