Structure of PDB 3u04 Chain A

Receptor sequence
>3u04A (length=172) Species: 205920 (Ehrlichia chaffeensis str. Arkansas) [Search protein sequence]
MSVLSIVTVPDKRLSLCSEEVEKVDQSIRKLVDDMFETMHANQGLGLAAV
QVGVHKRILVMNVPEEIEGYELYGGPYCIINPKIVDISQEKVKLKEGCLS
VPGYFDYIVRPQRIAVQYLDYNGNECIIKAQGWLARCLQHEIDHLNGTVF
LKYLSKFKRDFAIEKVKKKERT
3D structure
PDB3u04 Crystal structure of peptide deformylase from ehrlichia chaffeensis in complex with actinonin
ChainA
Resolution1.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C111 L112 H153 E154 H157
Catalytic site (residue number reindexed from 1) G46 Q51 C98 L99 H140 E141 H144
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C111 H153 H157 C98 H140 H144
BS02 BB2 A G44 L45 G46 Q51 K108 G110 C111 L112 F118 R149 H153 E154 H157 G44 L45 G46 Q51 K95 G97 C98 L99 F105 R136 H140 E141 H144
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:3u04, PDBe:3u04, PDBj:3u04
PDBsum3u04
PubMed
UniProtQ2GI30

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