Structure of PDB 3tvm Chain A

Receptor sequence
>3tvmA (length=268) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCE
MYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQG
TSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSHRQLVC
HVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDGEEAGL
ACRVKHSSLGGQDIILYW
3D structure
PDB3tvm Glycolipids that Elicit IFN-gama-Biased Responses from Natural Killer T Cells
ChainA
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A S114 G130 S109 G125
BS02 07P A C12 S28 F70 Y73 S76 D80 V118 W133 D153 T156 C168 F171 C7 S23 F65 Y68 S71 D75 V113 W128 D148 T151 C163 F166
External links
PDB RCSB:3tvm, PDBe:3tvm, PDBj:3tvm
PDBsum3tvm
PubMed22195564
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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