Structure of PDB 3tmd Chain A

Receptor sequence
>3tmdA (length=305) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence]
DYVSIRVSTLRGDQKIDFNAYVKINDKMILYLRRGDSFEGERLKRLKDKK
LRKMYILTDEENSYRTYLQKNIETAYDDTTGKDIQTRADIIQGSQQNNAE
EVFENPENVESYNYCKDAAGKYVNFIMSNAQALSAVMNIENTDKTISHHG
VTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSM
SPEDLALWKKHPIEGAQKVQDKKHFDQTVINIIGQHEETINGTGPKGLRE
KDMDPLAVLVSSANAMDRLITFEGVPKAEAAKKLMIDHVGKHPLQHIQHL
NDILK
3D structure
PDB3tmd The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases.
ChainA
Resolution2.641 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A H150 H183 D184 N265 H149 H182 D183 N264
BS02 FE A D184 H212 H237 E238 D183 H211 H236 E237
BS03 PO4 A H150 D184 H187 W209 H212 E238 N265 R269 H149 D183 H186 W208 H211 E237 N264 R268
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:3tmd, PDBe:3tmd, PDBj:3tmd
PDBsum3tmd
PubMed21990613
UniProtQ6MM30

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