Structure of PDB 3th0 Chain A

Receptor sequence
>3th0A (length=552) Species: 10754 (Lederbergvirus P22) [Search protein sequence]
YSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGG
KVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQ
WLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTL
EIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLS
GDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGV
KTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDY
PITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSG
AYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSGQSL
TIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRI
HKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCR
GAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLA
TL
3D structure
PDB3th0 An essential serotype recognition pocket on phage P22 tailspike protein forces Salmonella enterica serovar Paratyphi A O-antigen fragments to bind as nonsolution conformers.
ChainA
Resolution1.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 RAM A S237 E359 K363 Q366 W391 D395 S125 E247 K251 Q254 W279 D283 PDBbind-CN: -logKd/Ki=4.12,Kd=75.8uM
BS02 MAN A K363 Q366 K251 Q254 PDBbind-CN: -logKd/Ki=4.12,Kd=75.8uM
BS03 GLA A E359 W365 E247 W253 PDBbind-CN: -logKd/Ki=4.12,Kd=75.8uM
External links
PDB RCSB:3th0, PDBe:3th0, PDBj:3th0
PDBsum3th0
PubMed23292517
UniProtP12528|FIBER_BPP22 Tail spike protein (Gene Name=9)

[Back to BioLiP]