Structure of PDB 3td7 Chain A

Receptor sequence
>3td7A (length=253) Species: 212035 (Acanthamoeba polyphaga mimivirus) [Search protein sequence]
HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCR
LCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLS
YEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRI
ARMRGISDKYFAFLELATVLNGDFNELKKQSSWEYRNKYAQKKIRHMREN
AIPSIEEQGYWKGTPTIDELKLLLFLASNLNRTEVNDAINNVERLESTHY
IEN
3D structure
PDB3td7 Exploring ORFan domains in giant viruses: structure of mimivirus sulfhydryl oxidase R596.
ChainA
Resolution2.21 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.8.3.2: thiol oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A T37 G41 T42 G44 W45 H49 C83 Y114 H117 N118 V120 K123 L124 Y128 L130 V135 D174 R237 T6 G10 T11 G13 W14 H18 C52 Y83 H86 N87 V89 K92 L93 Y97 L99 V104 D135 R198
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016971 flavin-dependent sulfhydryl oxidase activity
GO:0016972 thiol oxidase activity
GO:0050660 flavin adenine dinucleotide binding
Cellular Component
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:3td7, PDBe:3td7, PDBj:3td7
PDBsum3td7
PubMed23209798
UniProtQ5UP54|YR596_MIMIV Probable FAD-linked sulfhydryl oxidase R596 (Gene Name=MIMI_R596)

[Back to BioLiP]