Structure of PDB 3sy7 Chain A

Receptor sequence
>3sy7A (length=382) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
DAFVSDQAEAKGFIEDSSLDLLLRNYYFNRDDRVDWTQGFLTTYESGFTQ
GTVGFGVDAFGYLGLKLDGTDDYSRAGGAVKVRISKTMLKWGEMQPTAPV
FAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTEELYATYAGETAKSAD
FIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNI
YRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGF
GGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYI
NGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFR
IRQAWHRANADQGEGDQNEFRLIVDYPLSILG
3D structure
PDB3sy7 Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
ChainA
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C8E A N25 W42 N25 W36
BS02 C8E A G102 A103 W115 G78 A79 W91
BS03 C8E A G189 Y191 L201 G154 Y156 L166
Gene Ontology
Molecular Function
GO:0008236 serine-type peptidase activity
GO:0015288 porin activity
Biological Process
GO:0006508 proteolysis
GO:0006811 monoatomic ion transport
GO:0015802 basic amino acid transport
GO:0055085 transmembrane transport
Cellular Component
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0019867 outer membrane
GO:0046930 pore complex

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Biological Process
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Cellular Component
External links
PDB RCSB:3sy7, PDBe:3sy7, PDBj:3sy7
PDBsum3sy7
PubMed22272184
UniProtP32722|PORD_PSEAE Porin D (Gene Name=oprD)

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