Structure of PDB 3sko Chain A

Receptor sequence
>3skoA (length=273) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRRAPWIE
QEGPEYWDRNTQAFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDV
GPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVA
EQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEATLRC
WALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGE
EQRYTCHVQHEGLPKPLTLRWEP
3D structure
PDB3sko A structural basis for varied alpha-beta TCR usage against an immunodominant EBV antigen restricted to a HLA-B8 molecule.
ChainA
Resolution1.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 R62 N63 F67 N70 T73 D74 S77 Y84 S97 Y99 Y123 T143 W147 V152 Q155 Y159 W167 Y171 Y7 R59 N60 F64 N67 T70 D71 S74 Y81 S94 Y96 Y120 T140 W144 V149 Q152 Y156 W164 Y168
External links
PDB RCSB:3sko, PDBe:3sko, PDBj:3sko
PDBsum3sko
PubMed22140258
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

[Back to BioLiP]